Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019081.1_514_1350_R

Intron Information:

Intron Rank:

144891

Intron Class:

major

Intron Phase:

Intron Coordinates:

514 - 1350

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGGCT

5'SS Class:

major

3'SS Sequence:

CGCTCGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAG

U12 Branch Point Sequence:

GGGTTCCCAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

67.1

35.3

Major BPS

49.3

-0

1.7

66.4

42.2

Major PPT

0.4

0.9

60.7

35.2

Minor 5ss

-2.9

3.6

47.1

Minor BPS

41.5

-0.6

1.9

48.87

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025340

Chromosome:

PEDO01019081.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034397

21 - 2093

2073

ENSAPLT00000029407

21 - 2093

2073