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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019102.1_2172_2332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2172 - 2332

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

TCTGCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAA

U12 Branch Point Sequence:

CACACATGAAAA

Flanking Amino Acid:

AANIAVEDGQDGVCLKTLGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

49.7

-0

1.1

36.4

Major PPT

80.7

0.69

0.8

77.5

31.3

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

43.9

-0.4

1.8

49.09

40.7

Associated Gene:

Gene:

GPATCH4

Ensembl Gene ID:

ENSAPLG00000017647

Chromosome:

PEDO01019102.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030481

884 - 3944

3061