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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_47129_47320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47129 - 47320

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGATCAG

U12 Branch Point Sequence:

GGAGGGTGACCC

Flanking Amino Acid:

ASENHQEILKDKKLIKAFFD

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

42.6

-0.4

1.7

45.5

47.5

Major PPT

75.4

0.57

0.8

69.7

31.1

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

32.3

-1.3

2.3

37.26

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023709

46979 - 54392

7414

ENSAPLT00000006341

46979 - 54392

7414