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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_48829_49507_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48829 - 49507

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCATGTGTG

5'SS Class:

major

3'SS Sequence:

ACACCAAAGGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCTTCCAGGACT

Flanking Amino Acid:

GAPRGPGEGAGPRQPPGTPW

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.2

72.5

41.7

Major BPS

0.22

1.2

52.4

43.3

Major PPT

47.3

-0.1

37.7

32.9

Minor 5ss

32.2

-2

4.2

44.5

Minor BPS

53.4

0.19

1.9

72.95

43.9

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023709

46979 - 54392

7414