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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_49404_49511_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49404 - 49511

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTGGCATG

5'SS Class:

weak_major

3'SS Sequence:

TTACCACGGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATTAC

U12 Branch Point Sequence:

AACCTATTACCA

Flanking Amino Acid:

KGAPRGPGEGTEQCVPCPSG

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.4

57.7

46.8

Major BPS

62.5

0.31

1.1

55.4

Major PPT

59.2

0.21

1.1

40.1

Minor 5ss

27.2

-2.6

3.9

32.4

42.2

Minor BPS

45.7

-0.3

1.8

53.21

38.6

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006341

46979 - 54392

7414