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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_49748_49886_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49748 - 49886

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

ACCGCGCACCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

TTCTCCCCACCG

Flanking Amino Acid:

EAEIKPEETTASCNLHCLRQ

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

43.9

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

53.8

0.09

42.9

37.1

Minor 5ss

32.9

-2

3.1

39.9

45.9

Minor BPS

46.8

-0.3

2.2

60.29

47.1

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006341

46979 - 54392

7414