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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_50049_50164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50049 - 50164

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAGCAGG

5'SS Class:

major

3'SS Sequence:

CCCCCTCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

GGGCCCTGAGTT

Flanking Amino Acid:

AKCHLHPRAKGGAAPCSDCQ

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.2

65.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

70.8

0.47

0.9

64.8

29.6

Minor 5ss

-2.5

3.8

31.4

42.5

Minor BPS

47.5

-0.1

1.7

60.42

42.8

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006341

46979 - 54392

7414