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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_50246_50727_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50246 - 50727

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCCAAACT

5'SS Class:

weak_major

3'SS Sequence:

CCTTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAGCAC

U12 Branch Point Sequence:

TGGTTCAGCACC

Flanking Amino Acid:

GFGGVPISLHEAVVAPIKQK

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.2

57.3

40.6

Major BPS

46.4

-0.2

1.4

53.6

41.6

Major PPT

85.6

0.8

0.6

84.6

23.2

Minor 5ss

19.6

-3.5

3.7

29.8

37.3

Minor BPS

43.7

-0.5

2.1

56.55

41.7

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006341

46979 - 54392

7414