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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019112.1_53172_53906_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53172 - 53906

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTCGGTGAT

5'SS Class:

major

3'SS Sequence:

CCAATGAAACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATTAACTTAATG

Flanking Amino Acid:

VFSCMSFFPWDQTRRAGLTR

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.4

63.2

43.4

Major BPS

78.2

0.7

77.9

32.1

Major PPT

41.4

-0.5

1.7

33.2

39.2

Minor 5ss

27.9

-2.5

3.3

31.7

42.7

Minor BPS

63.9

0.3

1.6

67.91

39.5

Associated Gene:

Gene:

SCUBE3

Ensembl Gene ID:

ENSAPLG00000006067

Chromosome:

PEDO01019112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023709

46979 - 54392

7414