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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019114.1_1365_1877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1365 - 1877

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TTCTTGCCATCC

Flanking Amino Acid:

LCLALAAAAAGPLPDGTGPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

71.8

0.49

0.9

62.3

38.5

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

38.2

-0.9

2.4

54.44

43.7

Associated Gene:

Gene:

APLN

Ensembl Gene ID:

ENSAPLG00000027556

Chromosome:

PEDO01019114.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044551

21 - 2049

2029