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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019127.1_4290_4552_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4290 - 4552

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCGGAGCCA

5'SS Class:

weak_major

3'SS Sequence:

GGGGGGGGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGGGAT

U12 Branch Point Sequence:

GGGAGGGGATGG

Flanking Amino Acid:

AVAPGDEVWVGAPPGGCAGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.2

47.5

34.2

Major BPS

-0.4

1.5

34.6

43.7

Major PPT

35.5

-0.8

1.6

36.7

Minor 5ss

13.4

-4.2

3.6

17.7

31.8

Minor BPS

17.5

-2.6

13.72

26.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018262

Chromosome:

PEDO01019127.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023386

1180 - 4610

3431