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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019164.1_2179_2361_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2179 - 2361

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCATCGAAT

5'SS Class:

major

3'SS Sequence:

GTGGGGGCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACGTGAA

U12 Branch Point Sequence:

TCGACGTGAAGT

Flanking Amino Acid:

LKSPDLGVKGEVGFEDLSGT

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

66.9

44.7

Major BPS

50.7

0.02

1.2

39.5

Major PPT

48.7

-0

1.2

38.8

44.6

Minor 5ss

35.2

-1.7

4.2

56.4

Minor BPS

43.3

-0.4

2.4

61.09

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019169

Chromosome:

PEDO01019164.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037465

166 - 5950

5785

ENSAPLT00000033679

1100 - 6385

5286