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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019164.1_3959_5170_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3959 - 5170

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGACGTT

5'SS Class:

major

3'SS Sequence:

GAAAGGGCCCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAACAT

U12 Branch Point Sequence:

GAAAAGTGAAAG

Flanking Amino Acid:

GPKVDIDVPEMKMPEMHIKT

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

65.5

40.5

Major BPS

55.8

0.15

1.3

63.4

42.8

Major PPT

43.6

-0.3

1.1

26.3

36.6

Minor 5ss

34.8

-1.7

3.8

54.5

49.7

Minor BPS

35.7

-1.2

2.1

35.08

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019169

Chromosome:

PEDO01019164.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047807

121 - 6385

6265