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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019164.1_4154_4939_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4154 - 4939

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACCCAAA

5'SS Class:

major

3'SS Sequence:

AATGCACATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

GATGCCCGAAAT

Flanking Amino Acid:

KFKMPEMHIKAPKFSMPDVD

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.2

57.7

46.7

Major BPS

74.2

0.6

0.9

75.7

Major PPT

49.6

-0

1.1

43.7

41.1

Minor 5ss

32.8

-2

4.1

48.2

47.5

Minor BPS

46.5

-0.1

65.6

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019169

Chromosome:

PEDO01019164.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021609

1100 - 5950

4851