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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019164.1_989_2860_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

989 - 2860

Intron Length:

1872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGGAGGCT

5'SS Class:

weak_major

3'SS Sequence:

GCGGTGGACGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAG

U12 Branch Point Sequence:

CCGACAGCAATT

Flanking Amino Acid:

EVKGPGLNVDAARRRALRPS

Intron Amino Acid Position:

970

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.1

52.8

38.2

Major BPS

0.22

1.5

67.7

36.5

Major PPT

41.5

-0.4

1.7

34.5

40.2

Minor 5ss

26.8

-2.7

3.9

41.6

45.6

Minor BPS

37.8

-0.8

2.2

49.49

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019169

Chromosome:

PEDO01019164.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032234

782 - 6385

5604