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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019165.1_11147_12290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11147 - 12290

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAC

U12 Branch Point Sequence:

CAGGAGGTAACC

Flanking Amino Acid:

PVETSTVTMQLLKIKPNGEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

50.5

0.01

1.3

53.1

40.5

Major PPT

84.1

0.77

0.8

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

36.2

-1

2.5

43.6

44.1

Associated Gene:

Gene:

PGF

Ensembl Gene ID:

ENSAPLG00000010094

Chromosome:

PEDO01019165.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033685

9876 - 14683

4808

ENSAPLT00000010504

10187 - 14410

4224