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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019238.1_6482_6559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6482 - 6559

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GCCCCCTGCAGC

Flanking Amino Acid:

VKPQAFQKHCERRHGPLSKL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

67.4

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

76.9

0.6

0.9

73.3

31.6

Minor 5ss

32.6

-2

3.2

45.3

Minor BPS

41.2

-0.7

2.1

45.01

43.1

Associated Gene:

Gene:

ATXN7L2

Ensembl Gene ID:

ENSAPLG00000024601

Chromosome:

PEDO01019238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020332

6026 - 11683

5658

ENSAPLT00000022293

6026 - 11047

5022