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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019238.1_6729_6800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6729 - 6800

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

CTTCTCTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CGCCTCTCACCG

Flanking Amino Acid:

LPDKAQKDNLCLFMPVVNLE

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.9

41.1

Major BPS

72.7

0.56

30.1

Major PPT

83.7

0.76

0.7

76.3

32.3

Minor 5ss

34.4

-1.8

2.9

39.9

40.3

Minor BPS

42.5

-0.7

1.8

40.97

43.4

Associated Gene:

Gene:

ATXN7L2

Ensembl Gene ID:

ENSAPLG00000024601

Chromosome:

PEDO01019238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022293

6026 - 11047

5022

ENSAPLT00000020332

6026 - 11683

5658