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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019260.1_1416_1498_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1416 - 1498

Intron Length:
83

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGTGTG

5'SS Class:
strong_major

3'SS Sequence:
CCCCCCCCACCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCCTAT

U12 Branch Point Sequence:
CCCATCCTATTT

Flanking Amino Acid:
LLINKEKTGQSDPLMSLMGF

Intron Amino Acid Position:
85

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.7
0.98
0.7
81.3
32.8

Major BPS
60
0.25
1.2
58.5
40

Major PPT
63.3
0.3
0.8
54.7
29.3

Minor 5ss
30.9
-2.2
3.2
39.6
46.4

Minor BPS
42.3
-0.5
1.8
51.97
43.5

Associated Gene:

Gene:
SIRT2

Ensembl Gene ID:

Chromosome:
PEDO01019260.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

786 - 1966
1181