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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019278.1_1078_1163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1078 - 1163

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CGGCCCCCACCG

Flanking Amino Acid:

SMALDTAAAVGTSDFCVAPD

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

38.4

-1

38.62

43.9

Associated Gene:

Gene:

TTYH2

Ensembl Gene ID:

ENSAPLG00000022865

Chromosome:

PEDO01019278.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045908

54 - 1880

1827

ENSAPLT00000017224

507 - 2281

1775