Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019278.1_1776_1861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1776 - 1861

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCATG

5'SS Class:

major

3'SS Sequence:

TGTCCTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

CCCCCCCAAATT

Flanking Amino Acid:

AMLDCRGLHKDYLDALIGIC

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

68.8

43.8

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

72.3

0.5

0.9

69.3

36.9

Minor 5ss

36.2

-1.6

3.2

47.3

48.3

Minor BPS

44.7

-0.3

57.26

45.9

Associated Gene:

Gene:

TTYH2

Ensembl Gene ID:

ENSAPLG00000022865

Chromosome:

PEDO01019278.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017224

507 - 2281

1775