Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019278.1_922_1004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

922 - 1004

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CGGTGCTCACCC

Flanking Amino Acid:

LAKRSRCLLTVMLCCGLLTL

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

59.6

39.9

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

0.56

0.7

24.7

Minor 5ss

29.6

-2.3

3.2

35.3

41.4

Minor BPS

-0.5

2.2

50.79

Associated Gene:

Gene:

TTYH2

Ensembl Gene ID:

ENSAPLG00000022865

Chromosome:

PEDO01019278.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045908

54 - 1880

1827

ENSAPLT00000017224

507 - 2281

1775