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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019281.1_1526_1698_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1526 - 1698

Intron Length:
173

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTGAGTCCA

5'SS Class:
strong_major

3'SS Sequence:
TTTATTTCAACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
TTTATTTCAACA

Flanking Amino Acid:
LIVAPGTFEVQIEEVRQVGS

Intron Amino Acid Position:
60

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
0.9
69.4
36.6

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
81.3
0.7
0.9
77.8
35.2

Minor 5ss
29.2
-2.4
2.7
30.5
36.3

Minor BPS
64.1
0.44
1.5
75.89
35.2

Associated Gene:

Gene:
ILF2

Ensembl Gene ID:

Chromosome:
PEDO01019281.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

212 - 4424
4213