Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019281.1_3170_3411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3170 - 3411

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CTGTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GGGCCGTGAGCT

Flanking Amino Acid:

KILGQEGDASYLASEMSTWD

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

62.1

43.9

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

81.4

0.71

0.9

76.3

37.7

Minor 5ss

32.6

-2

2.8

43.3

43.7

Minor BPS

41.3

-0.5

2.2

56.34

45.1

Associated Gene:

Gene:

ILF2

Ensembl Gene ID:

ENSAPLG00000016146

Chromosome:

PEDO01019281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016871

212 - 4424

4213