Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019281.1_4184_4279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4184 - 4279

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGTG

5'SS Class:

major

3'SS Sequence:

TCTCCTCGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTCTCCTCGAGC

Flanking Amino Acid:

LVNNILQNAQERLRRLNHSV

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

63.1

43.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

69.5

0.44

66.2

34.4

Minor 5ss

33.1

-1.9

3.6

45.4

49.7

Minor BPS

49.8

-0

1.9

61.63

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023430

Chromosome:

PEDO01019281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044147

3815 - 6508

2694

ENSAPLT00000030824

3815 - 6508

2694