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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019281.1_6136_6248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6136 - 6248

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

GATCCCGCATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

73.7

32.5

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

60.8

0.24

56.9

33.4

Minor 5ss

26.1

-2.7

2.9

22.6

37.5

Minor BPS

-0.6

2.3

54.53

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023430

Chromosome:

PEDO01019281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044147

3815 - 6508

2694