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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019283.1_567_1128_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
567 - 1128

Intron Length:
562

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGGGGC

5'SS Class:
major

3'SS Sequence:
CCGCTCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTGAC

U12 Branch Point Sequence:
CGGCTCCCACCG

Flanking Amino Acid:
SPPLKLSISDDWWVLQAPVQ

Intron Amino Acid Position:
115

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1
58.8
40.6

Major BPS
53.6
0.09
1.4
48.8
46.3

Major PPT
68
0.41
0.8
61.3
29.1

Minor 5ss
24.6
-2.9
3.4
32.5
42.6

Minor BPS
36
-1.2
1.9
33.94
39.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01019283.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2699
2679

21 - 2699
2679

21 - 2699
2679