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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019318.1_8842_8988_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8842 - 8988

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

CCCCCCCGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GTGCCCTTCCTC

Flanking Amino Acid:

EFPMLRDLLIRSHLQDLKDI

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

50.9

47.3

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

57.3

0.16

52.8

31.1

Minor 5ss

32.3

-2

39.4

45.9

Minor BPS

38.6

-0.8

3.5

56.12

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024244

Chromosome:

PEDO01019318.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040998

1059 - 12006

10948

ENSAPLT00000001897

5784 - 10133

4350