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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019323.1_2058_3097_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2058 - 3097

Intron Length:

1040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGGGACCC

5'SS Class:

weak_major

3'SS Sequence:

AGATCCGAACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACCATAATT

Flanking Amino Acid:

WVRYITQSGGETMEA*

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.1

44.1

38.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

41.6

-0.4

1.7

33.7

40.2

Minor 5ss

27.7

-2.6

3.2

30.7

36.2

Minor BPS

65.6

0.57

1.7

81.86

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021376

Chromosome:

PEDO01019323.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028351

2042 - 4634

2593