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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019324.1_1053_1487_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1053 - 1487

Intron Length:
435

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTACGTTTG

5'SS Class:
major

3'SS Sequence:
CTGTTTGCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTACAAA

U12 Branch Point Sequence:
GGTTACAAACCC

Flanking Amino Acid:
IVEVLLKDMTGWWLVENADK

Intron Amino Acid Position:
183

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
71.6
40.8

Major BPS
56
0.15
1.3
65.4
38

Major PPT
78.4
0.64
0.9
73
37.4

Minor 5ss
42.9
-0.8
3
54.6
44.9

Minor BPS
41
-0.7
2.2
54.03
43.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01019324.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

251 - 2237
1987

251 - 1933
1683