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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019324.1_1930_2104_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1930 - 2104

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CCCTTGGTCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

ACACCCTGCATG

Flanking Amino Acid:

RKSDNGWWLIRWEKSPSAQC

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.7

46.6

Major BPS

55.5

0.14

64.3

32.4

Major PPT

57.4

0.17

1.1

54.4

39.4

Minor 5ss

32.1

-2

3.1

40.5

45.4

Minor BPS

-0.6

1.9

45.01

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022660

Chromosome:

PEDO01019324.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045441

251 - 2237

1987