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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019394.1_548_655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

548 - 655

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CCCAACCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

CCCCCCCCAACC

Flanking Amino Acid:

HSGYDHPHDDCLNVTQLLVN

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

63.1

43.4

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

61.9

0.27

0.9

53.7

30.5

Minor 5ss

-2.5

30.4

36.1

Minor BPS

45.9

-0.3

1.9

52.85

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024486

Chromosome:

PEDO01019394.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031714

21 - 1359

1339