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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019404.1_9558_10107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9558 - 10107

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CCCGTTGTAACC

Flanking Amino Acid:

CAEHHNLSEQLLPKHCASTV

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

72.7

0.57

72.1

31.1

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

43.9

-0.4

47.92

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024896

Chromosome:

PEDO01019404.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035118

2793 - 13818

11026

ENSAPLT00000018744

2793 - 13818

11026