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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019456.1_3258_3901_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3258 - 3901

Intron Length:
644

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCCCCC

5'SS Class:
major

3'SS Sequence:
GGTCCCTCGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAG

U12 Branch Point Sequence:
TGGTGCTGAGAG

Flanking Amino Acid:
ILVLNQVDHFRFNRASLINV

Intron Amino Acid Position:
24

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.8
0.33
1.3
51.8
45.5

Major BPS
52.2
0.06
1.6
51.1
46.3

Major PPT
63.6
0.31
1
58.2
38.4

Minor 5ss
43.6
-0.7
3.1
60.9
43.6

Minor BPS
41.5
-0.7
2.1
46.5
45.6

Associated Gene:

Gene:
B4GALT7

Ensembl Gene ID:

Chromosome:
PEDO01019456.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3187 - 4912
1726