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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019456.1_4128_4354_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4128 - 4354

Intron Length:
227

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGCCCG

5'SS Class:
major

3'SS Sequence:
CCTCTCGTTTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGGTAC

U12 Branch Point Sequence:
TGGCTGGTACCG

Flanking Amino Acid:
LLLTKQHYEMCNGMSNRFWG

Intron Amino Acid Position:
100

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.56
1
55
43.8

Major BPS
43.7
-0.3
1.4
38.5
41.4

Major PPT
79.2
0.66
0.8
76
32.5

Minor 5ss
32.9
-2
3
36.9
41.3

Minor BPS
34.8
-1.2
2.5
40.34
43.9

Associated Gene:

Gene:
B4GALT7

Ensembl Gene ID:

Chromosome:
PEDO01019456.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3187 - 4912
1726