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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019470.1_1135_1586_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1135 - 1586

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCACTTGCA

5'SS Class:

major

3'SS Sequence:

ATAAGCGGAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

ATGTGTAGAAAA

Flanking Amino Acid:

HFCRLGILCGVEVRRAAKAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.3

62.1

40.8

Major BPS

0.55

1.1

63.4

44.3

Major PPT

47.3

-0.1

1.1

36.4

39.7

Minor 5ss

21.2

-3.3

3.9

36.9

Minor BPS

41.3

-0.6

52.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024353

Chromosome:

PEDO01019470.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018609

504 - 1667

1164