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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019543.1_33472_35084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33472 - 35084

Intron Length:

1613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGCG

5'SS Class:

major

3'SS Sequence:

TGGGAATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AGTCAATTAAAA

Flanking Amino Acid:

GVRGAIWQLLRVNDLKTGTL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.4

42.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

62.5

0.28

1.1

53.8

44.8

Minor 5ss

35.1

-1.7

3.5

47.6

Minor BPS

47.9

-0.1

1.8

60.59

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025400

Chromosome:

PEDO01019543.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043235

21995 - 35449

13455