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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019545.1_735_1252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

735 - 1252

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGCG

5'SS Class:

major

3'SS Sequence:

ACCGTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GGTTCCCGACCC

Flanking Amino Acid:

AAAVGEERRSASSTPSTPCW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

56.7

42.7

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

0.27

0.9

Minor 5ss

25.7

-2.8

3.1

23.3

37.3

Minor BPS

-0.2

2.1

62.1

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019715

Chromosome:

PEDO01019545.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048323

21 - 1679

1659