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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019546.1_1891_2001_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1891 - 2001

Intron Length:
111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTGAGGGGC

5'SS Class:
major

3'SS Sequence:
TGCTCTGCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGGCAC

U12 Branch Point Sequence:
GTGGCGGTGACA

Flanking Amino Acid:
KANPPRYKGIGDCVKQTVRD

Intron Amino Acid Position:
118

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1
58.8
40.6

Major BPS
50
0
1.5
63.1
44.5

Major PPT
70
0.45
0.9
61.3
40.1

Minor 5ss
24.6
-2.9
3.4
32.5
42.6

Minor BPS
41.1
-0.7
2.6
54.38
44.7

Associated Gene:

Gene:
SLC25A1

Ensembl Gene ID:

Chromosome:
PEDO01019546.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1539 - 2987
1449