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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019546.1_2394_2482_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2394 - 2482

Intron Length:
89

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGGGGC

5'SS Class:
major

3'SS Sequence:
CGTCTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACCAAC

U12 Branch Point Sequence:
CTGGCCTCAGCC

Flanking Amino Acid:
VVVCPMETVKVKFIHDQCSP

Intron Amino Acid Position:
198

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1
61.4
37.5

Major BPS
46.8
-0.2
1.1
52
30.4

Major PPT
72.3
0.5
0.8
65.7
30.3

Minor 5ss
22.7
-3.1
3.5
31.5
43.1

Minor BPS
47.9
-0.1
1.9
58.23
46.6

Associated Gene:

Gene:
SLC25A1

Ensembl Gene ID:

Chromosome:
PEDO01019546.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1539 - 2987
1449