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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019587.1_2135_2919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2135 - 2919

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

GATATTTGAACT

Flanking Amino Acid:

SVWDEDAPDDESTNVPFTIT

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

77.5

0.62

0.8

68.9

37.1

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

57.5

0.31

1.4

71.47

Associated Gene:

Gene:

AVPR1B

Ensembl Gene ID:

ENSAPLG00000022921

Chromosome:

PEDO01019587.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044258

842 - 3895

3054