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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019606.1_1733_2816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1733 - 2816

Intron Length:

1084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

CTAACCAAAACA

Flanking Amino Acid:

EQAQKELQKLRKNIQDLNWQ

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

0.45

0.9

67.6

25.3

Major PPT

73.4

0.53

1.7

81.2

36.5

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

48.2

-0.1

62.03

43.6

Associated Gene:

Gene:

BCAS2

Ensembl Gene ID:

ENSAPLG00000010436

Chromosome:

PEDO01019606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010857

21 - 3648

3628