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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019606.1_2898_3429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2898 - 3429

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TGCTCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TAGCACTGAAAG

Flanking Amino Acid:

AGAKLREMESTWVSLVSKNY

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

75.7

34.4

Major BPS

0.3

34.1

Major PPT

78.9

0.65

0.8

69.5

36.8

Minor 5ss

33.2

-1.9

3.3

42.7

Minor BPS

46.1

-0.4

1.8

50.05

42.7

Associated Gene:

Gene:

BCAS2

Ensembl Gene ID:

ENSAPLG00000010436

Chromosome:

PEDO01019606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010857

21 - 3648

3628