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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019606.1_410_479_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

410 - 479

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CGCTGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGGGGCTGAGCG

Flanking Amino Acid:

RQPLELLSMKRYELPAPSSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

70.6

0.46

60.5

44.8

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

38.1

-1

36.44

45.2

Associated Gene:

Gene:

BCAS2

Ensembl Gene ID:

ENSAPLG00000010436

Chromosome:

PEDO01019606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010857

21 - 3648

3628