Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019610.1_1678_1847_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1678 - 1847

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCGAGAGGA

5'SS Class:

weak_major

3'SS Sequence:

CCGTTCCCATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

GGGAGCTGAATT

Flanking Amino Acid:

PCCGETEARHNPCALLPTGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.4

54.4

39.8

Major BPS

58.2

0.2

1.1

49.1

Major PPT

68.9

0.43

0.9

66.9

34.1

Minor 5ss

16.2

-3.9

3.7

25.7

37.8

Minor BPS

46.3

-0.2

1.9

59.31

43.7

Associated Gene:

Gene:

DYSF

Ensembl Gene ID:

ENSAPLG00000003642

Chromosome:

PEDO01019610.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044999

1611 - 69277

67667

ENSAPLT00000042663

1611 - 69277

67667