Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019610.1_65814_66151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65814 - 66151

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTGACCTCAATT

Flanking Amino Acid:

PNMNPKLEDPKRPETSFLWF

Intron Amino Acid Position:

1629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

31.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

76.4

0.6

69.9

41.1

Minor 5ss

32.4

-2

3.3

39.8

Minor BPS

61.1

0.43

1.6

74.07

42.7

Associated Gene:

Gene:

DYSF

Ensembl Gene ID:

ENSAPLG00000003642

Chromosome:

PEDO01019610.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019369

537 - 69277

68741

ENSAPLT00000035668

1611 - 69277

67667

ENSAPLT00000003833

1877 - 69277

67401

ENSAPLT00000033294

1877 - 69277

67401

ENSAPLT00000026611

537 - 69277

68741

ENSAPLT00000044999

1611 - 69277

67667

ENSAPLT00000019409

1877 - 69277

67401

ENSAPLT00000042663

1611 - 69277

67667