Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019610.1_9602_9748_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9602 - 9748

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCTGTCC

5'SS Class:

weak_major

3'SS Sequence:

CTGTGCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGGTCGCTGACG

Flanking Amino Acid:

AQKPSAAALPMDDGLGFLPT

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.1

50.3

35.2

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

0.43

0.9

62.1

34.8

Minor 5ss

33.3

-1.9

3.4

41.8

39.4

Minor BPS

43.1

-0.6

2.4

48.94

44.5

Associated Gene:

Gene:

DYSF

Ensembl Gene ID:

ENSAPLG00000003642

Chromosome:

PEDO01019610.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033294

1877 - 69277

67401