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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019634.1_1296_1631_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1296 - 1631

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCGGCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

TCCACAGTGACC

Flanking Amino Acid:

VPIEQYRAWLDEDSNLDPSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

58.5

0.19

49.4

39.2

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

43.9

-0.5

2.3

55.38

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024581

Chromosome:

PEDO01019634.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047409

21 - 1801

1781

ENSAPLT00000028788

269 - 1772

1504