Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019635.1_808_890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

808 - 890

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ACCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

GTGCCCATCACC

Flanking Amino Acid:

QPEILLGTIPGAGGTQRLTR

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

0.45

0.8

61.1

34.4

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

48.3

-0.1

2.1

61.81

Associated Gene:

Gene:

ECHS1

Ensembl Gene ID:

ENSAPLG00000014208

Chromosome:

PEDO01019635.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014809

26 - 1487

1462