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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019644.1_821_1147_F

Intron Information:

Intron Rank:

147098

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

821 - 1147

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GC-TG

5'SS Sequence:

TTG|GCCATCGTT

5'SS Class:

weak_major

3'SS Sequence:

TTGGCCACTGTTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TTGACCACTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.3

65.8

42.5

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

38.9

-0.6

3.1

52.4

37.9

Minor 5ss

27.6

-2.6

4.3

44.2

45.5

Minor BPS

44.5

-0.3

2.1

66.18

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029212

Chromosome:

PEDO01019644.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022983

21 - 2871

2851